Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936146.1_cds_XP_016481787.1_73076
CDS Infomation

[gene=LOC107802744] [db_xref=GeneID:107802744] [protein=tRNA-specific 2-thiouridylase MnmA-like] [protein_id=XP_016481787.1] [location=join(29140..29499,30079..30153,30485..30538,30743..30821,30907..31034,31980..32063,32248..32331,33015..33166,33505..33655,33980..34279)] [gbkey=CDS]
Sequence

ATGCTAAGGGCAACCATGTCAACAATCCCTCTTACCCTTCAATCTTCACAATCTCTCAAA
CATTTATTCTCCCTTTCCCCTTTCCAAAACCCCCTTATCCACTCTTTTACTCAACTAAAA
AAGCACCCAACTTTTACCAGAAGACTGTTTTCTCTAAAACCCATTTCAGTTTCATCCCCA
ATTAGGACTTATGTGGATGAGAAATTCGACCCCACATACTTATCTTGCTCCATGCCACAG
AAGAATCCACTCAAAGTTGCGGTTTTGGTTAGTGGCGGCGTTGATAGCAGCGTTGCTCTT
AGACTGCTTCATGCTGCTGGACATTCCTGCACTGCTTTTTATCTCAAGATTTGGTTTCAA
GAAGACTTTGAGAACTTTTGGTCTGAATGCCCATGGGAGGATGACTTGAAATATGCAAAG
GCTGTTTGTGACCAGGTTGATGTACCATTGGAAGTTGTCCATTTGACTGATGAATATTGG
AATAATGTGGTATCATATATCATTGAGGAGTACAAATGTGGCAGGACTCCAAATCCAGAT
GTCCTTTGTAATACTAGAATAAAATTTGGTGCTTTTATGGATGCCATTAGTGGAATGGAA
TTTGACTTTGTTGCTTCTGGACATTATGCAAAGATTGTCCACGCATTTACTGAGCATCTG
GATGAACCTTCTGTCTTAGAATTGTCAAAGGATATGGTCAAGGACCAAACCTACTTCCTT
TCGCATCTCTCACAGGCTCAGCTTAAACGGCTGATTTTCCCACTTGGATGTATCCCAAAG
GATGAAGTTCGCATGCTTGCTAAATCATTTAATCTACCAAACCAAGACAGGAAGGATTCG
CAAGGAATATGCTTTCTTGGCAAGATAAAATTCAGTGAATTTGTCGCTAGACACATTGGA
GAATCAGAAGGTGTTATATTGGAAGCAGAGAGTGGAGATTATCTCGGAAACCACCGTGGC
TTTTGGTTCTATACTATTGGCCAACGCCAAGGTTTACGTCTTCCTGGAGGGCCCTGGTAT
GTTGTGGAGAAAGATATTAAAAACAATGTCGTATATGTATCAAGAAATTATTTCTCTGTT
GACAAGAAAAGACGGTTATTTTGTGTTGGATCCTTGAAATGGCTCAGTGGGTTACCTCCT
AGACAAATCAGTCAGCTTCAATGCAAGGTTCGTCATGGTCCCGGTTTTTACAACTGCAGC
TTGGTCATAGAAGTTGATGAACACGGTCAGGAAGTTGCAGTTGTCCGGATATCTGAAGAT
GATCAGGGTCTGGCAGCTGGACAATTTGCAGCCTTTTACGACGGAAGAACTTGTATTGGT
TCTGGCGTAATACTGGAGTCATGGGATGATCAGGGATATCCAATTTGTGCGAGGGCTCTT
GAAATTGCTCGAATGGAAGATAAATCCAAGCTCGGGAAACCAGTCAAGATAATGGTTAAA
CCAGAGCAGAGTCTTGCTACAATCTGA

Peptide Sequence

PEP ID

XP_016481787.1
PEP Infomation

PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Nicotiana tabacum]
Sequence

MLRATMSTIPLTLQSSQSLKHLFSLSPFQNPLIHSFTQLKKHPTFTRRLFSLKPISVSSP
IRTYVDEKFDPTYLSCSMPQKNPLKVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQ
EDFENFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWNNVVSYIIEEYKCGRTPNPD
VLCNTRIKFGAFMDAISGMEFDFVASGHYAKIVHAFTEHLDEPSVLELSKDMVKDQTYFL
SHLSQAQLKRLIFPLGCIPKDEVRMLAKSFNLPNQDRKDSQGICFLGKIKFSEFVARHIG
ESEGVILEAESGDYLGNHRGFWFYTIGQRQGLRLPGGPWYVVEKDIKNNVVYVSRNYFSV
DKKRRLFCVGSLKWLSGLPPRQISQLQCKVRHGPGFYNCSLVIEVDEHGQEVAVVRISED
DQGLAAGQFAAFYDGRTCIGSGVILESWDDQGYPICARALEIARMEDKSKLGKPVKIMVK
PEQSLATI

Transcript Sequence

Gene sequence data has not been registered.